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Update fhir-analytics example
Change admin password to "admin" Add init bundle to load Questionnaire
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‎fhir-analytics/docker-compose.yaml

+4-1
Original file line numberDiff line numberDiff line change
@@ -17,10 +17,13 @@ services:
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pull_policy: always
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depends_on:
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- aidbox-db
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volumes:
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- ./resources:/resources
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ports:
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- 8080:8080
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environment:
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AIDBOX_ADMIN_PASSWORD: password
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BOX_INIT_BUNDLE: 'file:///resources/init-bundle.json'
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AIDBOX_ADMIN_PASSWORD: admin
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AIDBOX_CLIENT_SECRET: secret
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AIDBOX_COMPLIANCE: enabled
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AIDBOX_CORRECT_AIDBOX_FORMAT: true

‎fhir-analytics/resources/init-bundle.json

+354
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@@ -0,0 +1,354 @@
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{
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"type": "batch",
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"entry": [
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{
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"resource": {
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"resourceType": "Questionnaire",
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"title": "CVD Reference Form",
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"id": "cvd-reference-form",
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"status": "draft",
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"url": "http://forms.aidbox.io/questionnaire/cvd-form",
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"item": [
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{
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"item": [
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{
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"text": "Given",
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"type": "string",
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"linkId": "kG70nh3M",
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"extension": [
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{
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"url": "http://aidbox.io/questionnaire-itemColumnSize",
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"valueInteger": 4
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}
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]
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},
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{
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"text": "Family",
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"type": "string",
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"linkId": "kpiXBdPU",
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"extension": [
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{
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"url": "http://aidbox.io/questionnaire-itemColumnSize",
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"valueInteger": 4
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}
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]
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},
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{
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"text": "Gender",
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"type": "choice",
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"linkId": "Jw_kMVir",
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"extension": [
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{
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"url": "http://aidbox.io/questionnaire-itemColumnSize",
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"valueInteger": 4
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}
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],
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"answerOption": [
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{
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"valueCoding": {
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"code": "male",
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"display": "Male"
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}
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},
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{
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"valueCoding": {
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"code": "female",
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"display": "Female"
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}
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}
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]
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}
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],
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"text": "Patient",
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"type": "group",
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"linkId": "Zicv0gIs"
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},
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{
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"item": [
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{
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"text": "Height",
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"type": "quantity",
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"linkId": "height",
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"extension": [
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{
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"url": "http://hl7.org/fhir/StructureDefinition/questionnaire-unitOption",
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"valueCoding": {
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"display": "cm"
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}
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}
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]
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},
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{
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"text": "Weight",
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"type": "quantity",
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"linkId": "weight",
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"extension": [
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{
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"url": "http://hl7.org/fhir/StructureDefinition/questionnaire-unitOption",
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"valueCoding": {
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"display": "kg"
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}
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}
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]
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},
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{
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"code": [
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{
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"code": "60621009",
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"system": "http://snomed.info/sct",
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"display": "Body Mass Index "
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}
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],
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"item": [
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{
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"text": "BMI=[Wt(kg) / Ht(cm) / Ht(cm)] * 10000",
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"type": "display",
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"linkId": "S1FZst5d",
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"extension": [
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{
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"url": "http://hl7.org/fhir/StructureDefinition/questionnaire-itemControl",
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"valueCodeableConcept": {
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"coding": [
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{
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"code": "help"
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}
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]
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}
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}
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]
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}
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],
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"text": "BMI",
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"type": "decimal",
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"linkId": "Bx4DZWYr",
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"readOnly": true,
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"extension": [
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{
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"url": "http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-calculatedExpression",
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"valueExpression": {
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"language": "text/fhirpath",
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"expression": "(%resource.repeat(item).where(linkId='weight').answer.value.value / \n%resource.repeat(item).where(linkId='height').answer.value.value.power(2)) * 10000"
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}
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},
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{
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"url": "http://hl7.org/fhir/StructureDefinition/maxValue",
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"valueDecimal": 4
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},
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{
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"url": "http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-observationExtract",
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"valueBoolean": true
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},
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{
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"url": "http://aidbox.io/questionnaire-itemColumnSize",
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"valueInteger": 10
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}
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]
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},
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{
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"text": "Obesity",
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"type": "boolean",
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"linkId": "zZvgjBlR",
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"readOnly": true,
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"extension": [
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{
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"url": "http://aidbox.io/questionnaire-itemColumnSize",
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"valueInteger": 2
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},
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{
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"url": "http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-calculatedExpression",
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"valueExpression": {
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"language": "text/fhirpath",
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"expression": "%resource.repeat(item).where(linkId='Bx4DZWYr').answer.value > 25.0"
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}
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}
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]
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}
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],
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"text": "Obesity",
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"type": "group",
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"linkId": "N6IfpJcM"
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},
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{
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"code": [
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{
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"code": "365981007",
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"system": "http://snomed.info/sct",
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"display": "Tobacco smoking behavior - finding"
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}
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],
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"text": "Smoking Status",
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"type": "choice",
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"linkId": "m17jd1Yn",
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"extension": [
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{
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"url": "http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-observationExtract",
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"valueBoolean": true
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}
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],
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"answerOption": [
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{
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"valueCoding": {
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"code": "266919005",
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"system": "http://snomed.info/sct",
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"display": "Never smoked tobacco"
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}
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},
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{
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"valueCoding": {
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"code": "77176002",
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"system": "http://snomed.info/sct",
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"display": "Smoker"
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}
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},
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{
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"valueCoding": {
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"code": "43381005",
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"system": "http://snomed.info/sct",
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"display": "Passive smoker"
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}
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},
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{
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"valueCoding": {
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"code": "160617001",
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"system": "http://snomed.info/sct",
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"display": "Stopped smoking"
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}
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}
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]
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},
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{
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"text": "Alcohol Intake",
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"type": "choice",
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"linkId": "mBMblYF9",
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"answerOption": [
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{
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"valueCoding": {
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"code": "never-consumed",
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"display": "Never Consumed"
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}
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},
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{
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"valueCoding": {
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"code": "yes",
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"display": "Yes"
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}
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}
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]
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},
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{
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"item": [
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{
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"code": [
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{
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"code": "719848005",
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"system": "http://snomed.info/sct",
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"display": "Disorder caused by alcohol"
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}
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],
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"text": "In the past 6 months had 5 drinks in a row",
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"type": "choice",
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"linkId": "Ua0r9Pmh",
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"extension": [
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{
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"url": "http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-observationExtract",
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"valueBoolean": true
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}
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],
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"enableWhen": [
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{
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"answerCoding": {
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"code": "male",
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"display": "Male"
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},
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"operator": "=",
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"question": "Jw_kMVir"
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}
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],
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"answerOption": [
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{
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"valueCoding": {
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"code": "373066001",
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"system": "http://snomed.info/sct",
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"display": "Yes"
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}
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},
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{
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"valueCoding": {
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"code": "373067005",
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"system": "http://snomed.info/sct",
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"display": "No"
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}
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}
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],
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"enableBehavior": "all"
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},
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{
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"code": [
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{
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"code": "719848005",
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"system": "http://snomed.info/sct",
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"display": "Disorder caused by alcohol"
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}
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],
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"text": "In the past 6 months had 4 drinks in a row",
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"type": "choice",
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"linkId": "8nvUb8xC",
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"extension": [
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{
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"url": "http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-observationExtract",
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"valueBoolean": true
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}
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],
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"enableWhen": [
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{
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"answerCoding": {
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"code": "female",
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"display": "Female"
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},
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"operator": "=",
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"question": "Jw_kMVir"
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}
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],
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"answerOption": [
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{
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"valueCoding": {
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"code": "373066001",
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"system": "http://snomed.info/sct",
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"display": "Yes"
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}
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},
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{
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"valueCoding": {
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"code": "373067005",
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"system": "http://snomed.info/sct",
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"display": "No"
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}
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}
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],
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"enableBehavior": "all"
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}
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],
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"text": "Excessive Alcohol Intake",
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"type": "group",
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"linkId": "qyIwVBRd",
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"enableWhen": [
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{
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"answerCoding": {
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"code": "yes",
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"display": "Yes"
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},
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"operator": "=",
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"question": "mBMblYF9"
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}
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],
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"enableBehavior": "all"
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}
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]
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},
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"request": {
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"method": "PUT",
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"url": "/Questionnaire/cvd-reference-form"
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}
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}
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]
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}

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