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Create RarediseaseConfigurator #4212

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Vince-janv opened this issue Feb 17, 2025 · 0 comments

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Standardised pipe...

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Vince-janv commented Feb 17, 2025 •

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Write a RarediseaseConfigurator with the method create_config. This should inherit from Configurator(ABC)

This should do the same thing the current RarediseaseAnalysisAPI.config_case does.

The managed_variants and panel_files do not need to be fetched from scout here.

It should return a RarediseaseConfig(BaseModel) with the fields needed to start the pipeline

Vince-janv added this to the Standardised pipeline integration milestone

diitaz93 self-assigned this

diitaz93 mentioned this issue

Add raredisease configurator #4228

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