Technical debt: Reference path not used in Crunchy

[islean]

🧩 Technical Debt Report

Description

The init of the CrunchyAPI specifies a reference_path, which is also specified in the cg.yaml. As mentioned by SD, this parameter is not used anywhere and should be removed, however.

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Location

• File(s):
  • cg/apps/crunchy/crunchy.py
  • [cg.yaml](https://github.com/Clinical-Genomics/servers/blob/299dd00a0422bc101278968dbcf8c4f5c8a81238/config/hasta.scilifelab.se/cg.yaml#L288)
• Module/Component:
  • e.g., CrunchyAPI

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Impact

• Performance: Is it causing delays or inefficiency?
• Maintainability: Is it hard to update or debug?
• Scalability: Does it hinder growth or adding new features?
• Other: Any other impacts?

Only confusion and error prone.

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Proposed Resolution

• Refactoring: Just delete the lines

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Estimated Effort

• Effort Level: XS
• Time Estimate: <1 hour

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