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setup.py
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from setuptools import setup
setup(
name='PyWGCNA', # the name of your package
packages=['PyWGCNA'], # same as above
version='2.2.0', # version number
license='MIT', # license type
description='PyWGCNA is a Python package designed to do Weighted correlation network analysis (WGCNA)',
# short description
author='Narges Rezaie', # your name
author_email='[email protected]', # your email
url='https://github.com/mortazavilab/PyWGCNA', # url to your git repo
download_url='https://github.com/mortazavilab/PyWGCNA/archive/refs/tags/V2.2.0.zip', # link to the tar.gz file associated with this release
keywords=['PyWGCNA', 'WGCNA', 'bulk', 'gene clustering', 'network analysis'], #
install_requires=[ # these can also include >, <, == to enforce version compatibility
'pandas>=2.1.0', # make sure the packages you put here are those NOT included in the
'numpy>=2.1.0', # base python distribution
'scipy>=1.9.1',
'scikit-learn>=1.2.2',
'statsmodels>=0.14.0',
'matplotlib>=3.9.1',
'seaborn>=0.11.2',
'biomart>=0.9.2',
'gseapy>=1.1.3',
'pyvis==0.3.1',
'setuptools>=67.4.0',
'biomart>=0.9.2',
'reactome2py>=3.0.0',
'anndata>=0.10.8',
'requests>=2.28.1',
'networkx>=2.8.4',
'rsrc>=0.1.3',
'psutil>=5.9.0',
'requests>=2.28.1',
],
classifiers=[ # choose from here: https://pypi.org/classifiers/
'Development Status :: 3 - Alpha',
'Intended Audience :: Science/Research ',
'Topic :: Scientific/Engineering :: Bio-Informatics',
'License :: OSI Approved :: MIT License',
'Programming Language :: Python :: 3.10',
],
)