Update dockerfile and jenkins for Trilinos 13.2

Author: sethrj

.jenkins

@@ -31,6 +31,7 @@ pipeline {
                         dir('build') {
                             sh '''
                                 cmake \
+                                  -GNinja \
                                   -D CMAKE_INSTALL_PREFIX=$FORTRILINOS_DIR \
                                   -D CMAKE_BUILD_TYPE=Debug \
                                   -D CMAKE_CXX_COMPILER_LAUNCHER=ccache \
@@ -39,7 +40,7 @@ pipeline {
                                   -D ForTrilinos_EXAMPLES=ON \
                                 ..
                             '''
-                            sh 'make -j8 VERBOSE=1'
+                            sh 'ninja -v'
                             sh 'ctest $CTEST_OPTIONS'
                         }
                     }
@@ -49,7 +50,7 @@ pipeline {
                             xunit reduceLog: false, tools:[CTest(deleteOutputFiles: true, failIfNotNew: true, pattern: 'build/Testing/**/Test.xml', skipNoTestFiles: false, stopProcessingIfError: true)]
                         }
                         success {
-                            sh 'cd build && make install'
+                            sh 'cd build && ninja install'
                             sh 'rm -rf test_install && mkdir -p test_install'
                             dir('test_install') {
                                 sh 'cp -r ../example/test-installation .'

docker/Dockerfile

@@ -1,75 +1,50 @@
 # Build command:
-#   $ docker build -t aprokop/fortrilinos-stack:latest -f Dockerfile  .
-ARG BASE=nvidia/cuda:11.0.3-devel-ubuntu18.04
+#   $ docker build -t sethrj/fortrilinos-stack:latest -f Dockerfile  .
+ARG BASE=nvidia/cuda:11.2.2-devel-ubuntu20.04
 FROM $BASE
 
 ARG NPROC=8
 
-RUN if test ${NV_CUDA_LIB_VERSION}; then apt-key adv --fetch-keys https://developer.download.nvidia.com/compute/cuda/repos/ubuntu1804/x86_64/3bf863cc.pub; fi
-
 # Avoid tzdata dialog
 ARG DEBIAN_FRONTEND=noninteractive
 
-RUN apt-get update && apt-get install -yq \
+RUN apt-get -yqq update && apt-get install -yq \
         autoconf \
         bc \
         build-essential \
+        ca-certificates \
         ccache \
         curl \
-        environment-modules \
         gawk \
         gfortran \
+        g++ \
         git \
         lcov \
         libatlas-base-dev \
         libbz2-dev \
-        python2.7-dev \
-        tmux \
-        unzip \
+        libssl-dev \
+        mpich \
+        ninja-build \
+        python3-dev \
         valgrind \
         vim \
         wget \
         && \
     apt-get clean && \
     rm -rf /var/lib/apt/lists/*
 
-# Install CMake
 ENV CMAKE_DIR=/opt/cmake
-RUN CMAKE_VERSION=3.23.3 && \
-    CMAKE_URL=https://github.com/Kitware/CMake/releases/download/v${CMAKE_VERSION} && \
-    CMAKE_SCRIPT=cmake-${CMAKE_VERSION}-Linux-x86_64.sh && \
-    CMAKE_SHA256=cmake-${CMAKE_VERSION}-SHA-256.txt && \
+RUN CMAKE_URL=https://github.com/Kitware/CMake/releases/download/v3.23.3/cmake-3.23.3.tar.gz && \
+    CMAKE_ARCHIVE=cmake.tar.gz && \
     SCRATCH_DIR=/scratch && mkdir -p ${SCRATCH_DIR} && cd ${SCRATCH_DIR} && \
-    wget --quiet ${CMAKE_URL}/${CMAKE_SHA256} && \
-    wget --quiet ${CMAKE_URL}/${CMAKE_SHA256}.asc && \
-    wget --quiet ${CMAKE_URL}/${CMAKE_SCRIPT} && \
-    grep ${CMAKE_SCRIPT} ${CMAKE_SHA256} | sha256sum --check && \
+    wget --quiet ${CMAKE_URL}  --output-document=${CMAKE_ARCHIVE} && \
     mkdir -p ${CMAKE_DIR} && \
-    sh ${CMAKE_SCRIPT} --skip-license --prefix=${CMAKE_DIR} && \
+    tar -xf ${CMAKE_ARCHIVE} --strip-components=1 && \
+    ./bootstrap --prefix=${CMAKE_DIR} --generator=Ninja && \
+    ninja install && \
     rm -rf ${SCRATCH_DIR}
 ENV PATH=${CMAKE_DIR}/bin:$PATH
 
-# Install OpenMPI
-ENV OPENMPI_DIR=/opt/openmpi
-RUN OPENMPI_VERSION=4.1.4 && \
-    OPENMPI_VERSION_SHORT=$(echo "$OPENMPI_VERSION" | cut -d. -f1,2) && \
-    OPENMPI_SHA256=92912e175fd1234368c8730c03f4996fe5942e7479bb1d10059405e7f2b3930d && \
-    OPENMPI_URL=https://download.open-mpi.org/release/open-mpi/v${OPENMPI_VERSION_SHORT}/openmpi-${OPENMPI_VERSION}.tar.bz2 && \
-    OPENMPI_ARCHIVE=openmpi-${OPENMPI_VERSION}.tar.bz2 && \
-    SCRATCH_DIR=/scratch && mkdir -p ${SCRATCH_DIR} && cd ${SCRATCH_DIR} && \
-    wget --quiet ${OPENMPI_URL} --output-document=${OPENMPI_ARCHIVE} && \
-    echo "${OPENMPI_SHA256} ${OPENMPI_ARCHIVE}" | sha256sum --check && \
-    mkdir -p openmpi && \
-    tar -xf ${OPENMPI_ARCHIVE} -C openmpi --strip-components=1 && \
-    mkdir -p build && cd build && \
-    ../openmpi/configure --prefix=${OPENMPI_DIR} ${CUDA_OPTIONS} CFLAGS=-w && \
-    make -j${NPROCS} install && \
-    rm -rf ${SCRATCH_DIR}
-ENV PATH=${OPENMPI_DIR}/bin:$PATH
-
-# Workaround for Kokkos to find libcudart
-ENV LD_LIBRARY_PATH=/usr/local/cuda/targets/x86_64-linux/lib:${LD_LIBRARY_PATH}
-
 # Install Trilinos
 ENV TRILINOS_DIR=/opt/trilinos
 RUN TRILINOS_VERSION=13-2-0 && \
@@ -81,14 +56,13 @@ RUN TRILINOS_VERSION=13-2-0 && \
     tar -xf ${TRILINOS_ARCHIVE} -C trilinos --strip-components=1 && \
     mkdir -p build && cd build && \
     cmake \
+        -G Ninja \
         -D CMAKE_BUILD_TYPE=RelWithDebInfo \
         -D BUILD_SHARED_LIBS=ON \
         \
         -D CMAKE_INSTALL_PREFIX=${TRILINOS_DIR} \
         \
         -D TPL_ENABLE_Boost=OFF \
-              -D TPL_ENABLE_CUDA=ON \
-        -D TPL_ENABLE_CUDA=OFF \
         -D TPL_ENABLE_DLlib=OFF \
         -D TPL_ENABLE_MPI=ON \
         \
@@ -129,6 +103,6 @@ RUN TRILINOS_VERSION=13-2-0 && \
             -D Tpetra_ENABLE_DEPRECATED_CODE=OFF \
         \
     ../trilinos && \
-    make -j${NPROC} install && \
+    ninja -j${NPROC} install && \
     rm -rf ${SCRATCH_DIR}
 ENV TRILINOS_DIR=/opt/trilinos